STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_1007PFAM: O-methyltransferase family 2; KEGG: dat:HRM2_47060 SAM-dependent methyltransferase. (311 aa)    
Predicted Functional Partners:
Dtox_2658
PFAM: O-methyltransferase family 2; Methyltransferase type 12; KEGG: pca:Pcar_0859 QbsJ-like methyltransferase.
 
    0.730
Dtox_0362
PFAM: O-methyltransferase family 2; KEGG: sus:Acid_0820 hydroxyneurosporene-O- methyltransferase.
 
    0.721
Dtox_2850
Hypothetical protein; KEGG: aba:Acid345_0662 parallel beta-helix repeat protein.
  
     0.592
Dtox_1664
PFAM: metallophosphoesterase; KEGG: bha:BH2845 diadenosine tetraphosphatase.
   
   0.583
Dtox_3172
PFAM: protein of unknown function DUF114; KEGG: cco:CCC13826_1629 R2.LlaJI.
  
     0.571
Dtox_2674
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Methyltransferase type 12; Non-ribosomal peptide synthetase; condensation domain protein; KEGG: pfl:PFL_3492 pyochelin synthetase F.
   
 
 0.527
Dtox_1037
KEGG: dal:Dalk_5194 hypothetical protein.
  
     0.514
Dtox_4156
Putative transmembrane anti-sigma factor; KEGG: sfu:Sfum_1326 hypothetical protein.
  
     0.412
Dtox_2940
KEGG: dol:Dole_0046 hypothetical protein.
  
     0.403
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.