STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_1040TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: glo:Glov_3595 efflux transporter, RND family, MFP subunit. (500 aa)    
Predicted Functional Partners:
Dtox_1042
PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein.
 
  
 0.931
Dtox_1041
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ank:AnaeK_3059 ABC transporter-related protein.
 
 
 0.904
Dtox_2918
PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein.
 
  
 0.857
Dtox_4105
PFAM: protein of unknown function DUF214; KEGG: dal:Dalk_4858 protein of unknown function DUF214.
 
  
 0.853
Dtox_2919
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ank:AnaeK_3059 ABC transporter-related protein.
 
 
 0.807
Dtox_1572
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_7937 ABC transporter related.
 
 
 0.795
Dtox_4152
KEGG: gme:Gmet_3465 outer membrane efflux protein.
 
 
 0.719
Dtox_1924
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: pen:PSEEN4241 multidrug RND transporter, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.717
Dtox_0521
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: tdn:Suden_0535 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.675
Dtox_4149
KEGG: bsu:BSU09000 hypothetical protein.
  
     0.651
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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