STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_1216PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dat:HRM2_12320 TrxB. (287 aa)    
Predicted Functional Partners:
Dtox_1340
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; HI0933 family protein; KEGG: bha:BH3571 thioredoxin reductase (NADPH).
  
  
 
0.924
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.907
selD-2
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.907
Dtox_2256
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: apa:APP7_1136 thioredoxin; Belongs to the thioredoxin family.
 
 0.885
Dtox_2277
PFAM: Thioredoxin domain; KEGG: PtrTrxm3; thioredoxin m.
 
 
 0.849
Dtox_0355
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
 
 0.723
Dtox_2806
Peroxiredoxin; Contains selenocysteine; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: dat:HRM2_32850 PrxU.
  
 
 0.723
Dtox_0088
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA2957 pyruvate-flavodoxin oxidoreductase.
  
 
 0.642
Dtox_1107
Hypothetical protein.
  
 
 0.628
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.618
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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