STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_1276PFAM: dihydropteroate synthase DHPS; KEGG: dal:Dalk_4910 methionine synthase. (264 aa)    
Predicted Functional Partners:
Dtox_1272
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; Fe-S cluster domain protein; KEGG: sfu:Sfum_2564 acetyl-CoA decarbonylase/synthase complex subunit gamma.
 
 0.999
Dtox_1275
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; KEGG: dol:Dole_3186 acetyl-CoA decarbonylase/synthase complex subunit delta.
 
 
 0.998
Dtox_0024
TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; KEGG: geo:Geob_2541 cobalamin B12-binding domain protein.
  
 0.981
Dtox_1271
KEGG: sfu:Sfum_2565 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit.
 
  
 0.973
Dtox_3781
KEGG: sfu:Sfum_2565 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit.
 
  
 0.964
Dtox_1285
PFAM: methylenetetrahydrofolate reductase; KEGG: dol:Dole_1151 methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
 
  
 0.915
Dtox_1273
PFAM: ferredoxin; KEGG: dol:Dole_3100 ferredoxin.
 
 
 
 0.753
Dtox_1284
KEGG: dal:Dalk_3264 hypothetical protein.
 
   
 0.705
Dtox_1269
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dal:Dalk_4371 cobyrinic acid ac-diamide synthase.
 
   
 0.695
Dtox_0534
PFAM: methylenetetrahydrofolate reductase; KEGG: dol:Dole_2330 methylenetetrahydrofolate reductase (NAD(P)H); Belongs to the methylenetetrahydrofolate reductase family.
 
  
 0.694
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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