STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_1424KEGG: abu:Abu_0110 hypothetical protein. (712 aa)    
Predicted Functional Partners:
Dtox_1425
KEGG: abu:Abu_0109 hypothetical protein.
 
     0.958
Dtox_1427
PFAM: protein of unknown function DUF262; KEGG: pca:Pcar_0794 hypothetical protein.
 
   
 0.593
Dtox_3922
Hypothetical protein; KEGG: seh:SeHA_C2919 putative ATPase.
  
     0.470
Dtox_1426
Hypothetical protein; KEGG: dsh:Dshi_1918 modification methylase, putative.
       0.467
Dtox_1428
KEGG: pcr:Pcryo_2512 hypothetical protein.
       0.454
Dtox_1423
KEGG: sfu:Sfum_2747 hypothetical protein.
       0.443
Dtox_1784
ATPase-like protein; KEGG: bpy:Bphyt_1074 abortive phage resistance protein-like protein.
  
     0.427
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.