STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_1504KEGG: mxa:MXAN_1821 hypothetical protein. (348 aa)    
Predicted Functional Partners:
Dtox_1505
PFAM: AIG2 family protein; KEGG: pub:SAR11_1133 hypothetical protein.
 
    0.938
Dtox_1506
Hypothetical protein.
 
     0.909
Dtox_1252
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: dal:Dalk_4009 uroporphyrin-III C- methyltransferase.
  
  
 0.836
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 
 0.830
cysC-2
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 
 0.830
Dtox_3911
PFAM: AIG2 family protein; KEGG: pub:SAR11_1133 hypothetical protein.
 
    0.789
Dtox_1498
KEGG: sfu:Sfum_3819 hypothetical protein.
 
    0.782
Dtox_1502
Type IV secretory pathway VirB4 protein-like protein; KEGG: bar:GBAA_pXO2_0008 hypothetical protein.
 
     0.757
Dtox_1525
PFAM: Recombinase; KEGG: mgm:Mmc1_1125 recombinase.
  
     0.753
Dtox_1507
Hypothetical protein.
  
    0.740
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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