STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_1664PFAM: metallophosphoesterase; KEGG: bha:BH2845 diadenosine tetraphosphatase. (269 aa)    
Predicted Functional Partners:
Dtox_1663
KEGG: aba:Acid345_1764 membrane protein.
       0.655
Dtox_0327
KEGG: dat:HRM2_33640 putative SAM-dependent methyltransferase.
   
   0.583
Dtox_0451
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: net:Neut_1733 methyltransferase type 11.
   
   0.583
Dtox_0487
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: dds:Ddes_1510 cyclopropane-fatty-acyl- phospholipid synthase.
   
   0.583
Dtox_1007
PFAM: O-methyltransferase family 2; KEGG: dat:HRM2_47060 SAM-dependent methyltransferase.
   
   0.583
Dtox_1339
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: bar:GBAA4555 hypothetical protein.
   
   0.583
Dtox_2159
PFAM: Methyltransferase type 12; Methyltransferase type 11; Tellurite resistance methyltransferase, TehB, core; thiopurine S-methyltransferase; KEGG: acp:A2cp1_0197 methyltransferase type 11.
   
   0.583
Dtox_3841
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rms:RMA_0991 3-demethylubiquinone-9 3- methyltransferase.
   
   0.583
Dtox_2841
KEGG: glo:Glov_1957 methyltransferase type 11.
   
   0.572
Dtox_1516
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bha:BH3675 MerR family transcriptional regulator.
  
     0.481
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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