STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_1850KEGG: bba:Bd2872 hypothetical protein. (417 aa)    
Predicted Functional Partners:
Dtox_1849
TIGRFAM: phage minor structural protein; KEGG: bha:BH0962 hypothetical protein.
      0.805
Dtox_1853
Hypothetical protein.
  
   0.778
Dtox_1851
Hypothetical protein; KEGG: mno:Mnod_5047 fibronectin type III domain protein.
      
0.760
Dtox_0817
PFAM: lipolytic protein G-D-S-L family; KEGG: sml:Smlt3123 putative capsular polysaccharide biosynthesis protein.
  
   0.754
Dtox_1326
KEGG: plu:plu3558 hypothetical protein.
  
 
   0.716
Dtox_1852
KEGG: sfu:Sfum_2747 hypothetical protein.
       0.662
Dtox_3121
Mucin 17-like protein; KEGG: similar to mucin 17.
  
 
   0.634
Dtox_0675
PFAM: S-layer domain protein; KEGG: hypothetical protein.
  
 
   0.557
Dtox_3124
PFAM: Collagen triple helix repeat; KEGG: mlo:mlr0585 hypothetical protein.
 
     0.512
Dtox_3139
PFAM: major facilitator superfamily MFS_1; KEGG: bar:GBAA2628 permease, putative.
  
     0.466
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.