STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_1993TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: hch:HCH_04023 Co/Zn/Cd cation transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (326 aa)    
Predicted Functional Partners:
Dtox_3544
PFAM: protein of unknown function DUF21; CBS domain-containing protein; transporter-associated region; KEGG: cla:Cla_0455 conserved hypothetical protein, putative efflux protein (DUF21 domain protein).
 
      0.514
Dtox_1992
Hypothetical protein.
       0.483
Dtox_1742
TIGRFAM: cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: baa:BA_1177 E1-E2_ATPase, E1-E2 ATPase.
  
 
 0.447
Dtox_2078
TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bar:GBAA3859 heavy metal-transporting ATPase.
  
 
 0.447
Dtox_0199
PFAM: zinc/iron permease; KEGG: mca:MCA2417 ZIP zinc transporter family protein.
 
   
 0.421
Dtox_1994
KEGG: dat:HRM2_41960 hypothetical protein.
       0.403
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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