STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2043Hypothetical protein. (296 aa)    
Predicted Functional Partners:
Dtox_2042
PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: bha:BH2771 hypothetical protein.
 
  
 0.980
Dtox_2044
PFAM: glycosyl transferase family 2; KEGG: bha:BH2769 dolichyl-phosphate mannose synthase.
 
     0.957
Dtox_2045
KEGG: bha:BH2768 hypothetical protein.
 
     0.945
Dtox_2047
KEGG: bha:BH1523 hypothetical protein.
 
     0.928
Dtox_1115
KEGG: bha:BH0549 hypothetical protein.
 
     0.779
Dtox_2046
TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; peptidase M42 family protein; KEGG: dat:HRM2_27370 PepT.
       0.733
Dtox_3513
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: rec:RHECIAT_PC0000438 putative metal- dependent hydrolase protein.
  
     0.600
Dtox_2041
Sporulation transcriptional activator Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.
       0.582
Dtox_1266
PFAM: protein of unknown function UPF0153; KEGG: dat:HRM2_07420 hypothetical protein.
  
     0.569
Dtox_0985
PFAM: protein of unknown function UPF0153; KEGG: sun:SUN_1697 hypothetical protein.
  
     0.563
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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