STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2081Hypothetical protein. (32 aa)    
Predicted Functional Partners:
Dtox_2080
Hypothetical protein.
       0.686
Dtox_2082
PFAM: DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; AAA ATPase; KEGG: EMB25; EMB25 (EMBRYO DEFECTIVE 25); ATP- dependent helicase/ RNA helicase.
       0.458
Dtox_2083
PFAM: DSH domain protein; helicase domain protein; SMART: helicase domain protein; KEGG: translation repressor.
       0.458
Dtox_2084
PFAM: Excinuclease ABC C subunit domain protein; KEGG: afw:Anae109_2891 excinuclease ABC subunit C.
       0.444
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.