STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2103PFAM: protein of unknown function DUF1614; KEGG: bra:BRADO6889 hypothetical protein. (255 aa)    
Predicted Functional Partners:
Dtox_2104
TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein; KEGG: bar:GBAA2068 stage II sporulation protein P.
     0.989
Dtox_2105
KEGG: bar:GBAA2652 hypothetical protein.
 
     0.936
Dtox_2106
Hypothetical protein.
       0.752
Dtox_2067
PFAM: protein of unknown function DUF1458; KEGG: afw:Anae109_0307 hypothetical protein.
  
     0.750
Dtox_0249
PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: ade:Adeh_2305 dehydrogenase-like.
  
     0.731
Dtox_0203
KEGG: net:Neut_1101 hypothetical protein.
  
     0.724
Dtox_3630
KEGG: ank:AnaeK_1566 dehydrogenase-like protein.
  
     0.710
Dtox_0071
Hypothetical protein; KEGG: geo:Geob_2630 tetratricopeptide TPR_2 repeat protein.
  
     0.673
Dtox_3229
TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein; KEGG: bsu:BSU25530 required for dissolution of the septal cell wall (stage II sporulation).
 
     0.663
Dtox_2107
PFAM: protein of unknown function DUF512; KEGG: ppd:Ppro_2966 hypothetical protein.
       0.638
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.