STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2149Hypothetical protein; KEGG: mgm:Mmc1_2882 phage tail tape measure protein, TP901 family. (152 aa)    
Predicted Functional Partners:
Dtox_2150
Hypothetical protein.
       0.762
Dtox_4245
TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: bar:GBAA4082 prophage LambdaBa02, tape measure protein, putative.
 
     0.741
Dtox_1849
TIGRFAM: phage minor structural protein; KEGG: bha:BH0962 hypothetical protein.
 
 
 0.570
Dtox_2151
PFAM: GCN5-related N-acetyltransferase; KEGG: swp:swp_2337 histone acetyltransferase HPA2- like acetyltransferase.
       0.538
Dtox_1853
Hypothetical protein.
  
   0.504
Dtox_0817
PFAM: lipolytic protein G-D-S-L family; KEGG: sml:Smlt3123 putative capsular polysaccharide biosynthesis protein.
   
   0.477
Dtox_1850
KEGG: bba:Bd2872 hypothetical protein.
  
 
 0.435
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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