STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2173Hypothetical protein; KEGG: wsu:WS1649 DNA methylase-type I restriction- modification system. (177 aa)    
Predicted Functional Partners:
Dtox_2619
TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: mfa:Mfla_1220 type I restriction-modification system, M subunit.
  
 
 0.817
Dtox_4262
TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: cff:CFF8240_0990 type I restriction- modification system, M subunit.
  
 
 0.817
Dtox_2172
KEGG: zmo:ZMO1932 hypothetical protein.
       0.773
Dtox_4202
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
  
 0.657
Dtox_2171
KEGG: mgm:Mmc1_3239 hypothetical protein.
       0.496
Dtox_0998
KEGG: mmw:Mmwyl1_4371 hypothetical protein.
  
    0.467
Dtox_2687
KEGG: pna:Pnap_1140 putative ATP-binding protein.
  
    0.465
Dtox_3955
SMART: AAA ATPase; KEGG: msu:MS1390 hypothetical protein.
  
    0.465
Dtox_1537
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: she:Shewmr4_3209 putative transcriptional regulator.
  
    0.440
Dtox_2174
Cell division membrane protein-like protein; KEGG: baa:BA_1592 FTSW_RODA_SPOVE, cell cycle protein; Belongs to the SEDS family.
       0.422
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.