STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2220PFAM: IstB domain protein ATP-binding protein; KEGG: asa:ASA_P5G149 transposase subunit 2. (248 aa)    
Predicted Functional Partners:
Dtox_2217
KEGG: shw:Sputw3181_1114 integrase catalytic subunit.
    0.849
Dtox_2213
KEGG: vha:VIBHAR_06964 hypothetical protein.
    0.812
Dtox_2221
Hypothetical protein.
       0.675
Dtox_4210
PFAM: DnaB domain protein helicase domain protein; KEGG: pat:Patl_0251 replicative DNA helicase.
  
 
 0.448
Dtox_4349
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.448
Dtox_1866
Hypothetical protein; KEGG: sfu:Sfum_3184 replicative DNA helicase.
  
 
 0.434
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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