STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2392Hypothetical protein. (317 aa)    
Predicted Functional Partners:
Dtox_2391
PFAM: peptidase U32; KEGG: scl:sce2217 proteinase.
  
    0.798
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.781
Dtox_2393
KEGG: sus:Acid_0316 DNA-3-methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); Belongs to the DNA glycosylase MPG family.
       0.634
Dtox_2394
Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
       0.569
Dtox_3035
PFAM: protein of unknown function DUF633; KEGG: bar:GBAA4513 hypothetical protein.
  
  
 0.512
Dtox_1362
KEGG: bha:BH1230 hypothetical protein.
  
     0.459
Dtox_2599
Hypothetical protein.
  
     0.455
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: bar:GBAA4803 phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
  
 0.439
Dtox_1653
PFAM: FeoA family protein.
  
     0.421
Dtox_3033
PFAM: protein of unknown function DUF164; KEGG: dvm:DvMF_0258 protein of unknown function DUF164.
 
  
 0.419
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.