STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2405PFAM: acyltransferase 3; KEGG: mlo:mll4680 glycosyltransferase, contains similarity to NolL. (338 aa)    
Predicted Functional Partners:
Dtox_4144
KEGG: afr:AFE_0073 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP; PFAM: sugar transferase.
  
  
 0.787
Dtox_2845
KEGG: sun:SUN_0324 mannose-1-phosphate guanylyltransferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein.
  
  
 0.515
Dtox_3371
PFAM: O-antigen polymerase; KEGG: dps:DPPB82 related to polysaccharide transport proteins.
  
    0.470
Dtox_4116
PFAM: O-antigen polymerase; KEGG: mxa:MXAN_3026 O-antigen polymerase family protein.
  
    0.470
Dtox_2336
KEGG: gur:Gura_2702 hypothetical protein.
  
  
 0.469
Dtox_3271
KEGG: gur:Gura_2702 hypothetical protein.
  
  
 0.469
Dtox_0578
PFAM: Integral membrane protein TerC; KEGG: baa:BA_0977 hypothetical protein.
  
     0.419
Dtox_1920
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dvm:DvMF_2265 transcriptional regulator, MarR family.
  
     0.404
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.