STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2477KEGG: bmn:BMA10247_1151 hypothetical protein. (121 aa)    
Predicted Functional Partners:
Dtox_2478
Hypothetical protein.
       0.788
Dtox_2479
PFAM: TadE family protein; KEGG: sfu:Sfum_1495 TadE family protein.
       0.628
Dtox_2480
PFAM: peptidase A24A prepilin type IV; KEGG: dps:DP1537 hypothetical protein.
       0.628
Dtox_2481
Hypothetical protein.
       0.628
Dtox_2482
Hypothetical protein.
       0.592
Dtox_2476
PFAM: Appr-1-p processing domain protein; KEGG: tbd:Tbd_1489 Appr-1-p processing protein.
       0.576
Dtox_2474
Hypothetical protein.
       0.561
Dtox_2475
Hypothetical protein.
       0.561
Dtox_2483
Hypothetical protein.
       0.432
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.