STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2608TIGRFAM: stage III sporulation protein AD; KEGG: bsu:BSU24400 mutants block sporulation after engulfment (stage III sporulation). (129 aa)    
Predicted Functional Partners:
Dtox_2606
Hypothetical protein; KEGG: bha:BH2792 mutants block sporulation after engulfment.
 
  
 0.996
Dtox_2607
TIGRFAM: stage III sporulation protein AE; KEGG: bar:GBAA4413 stage III sporulation protein AE.
 
  
 0.995
Dtox_2609
TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation AC family protein; KEGG: bha:BH2795 mutants block sporulation after engulfment.
 
  
 0.990
Dtox_2610
KEGG: bsu:BSU24420 stage III sporulation protein SpoAB.
 
  
 0.970
Dtox_2605
TIGRFAM: stage III sporulation protein AG; KEGG: bha:BH2791 mutants block sporulation after engulfment.
 
  
 0.966
Dtox_2604
Hypothetical protein; KEGG: bha:BH2790 mutants block sporulation after engulfment.
 
  
 0.955
Dtox_2611
TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; KEGG: bha:BH2797 mutants block sporulation after engulfment.
 
  
 0.948
Dtox_2111
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
    0.865
Dtox_3072
TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: bha:BH1359 hypothetical protein.
  
  
 0.843
Dtox_2050
TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: bha:BH1526 stage II sporulation protein M.
  
  
 0.830
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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