STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2676PFAM: AMP-dependent synthetase and ligase; Chorismate binding-like; KEGG: pau:PA14_54940 putative siderophore biosynthesis enzyme. (991 aa)    
Predicted Functional Partners:
Dtox_2674
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Methyltransferase type 12; Non-ribosomal peptide synthetase; condensation domain protein; KEGG: pfl:PFL_3492 pyochelin synthetase F.
  
0.999
Dtox_2675
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Non- ribosomal peptide synthetase; phosphopantetheine-binding; condensation domain protein; KEGG: dde:Dde_1609 amino acid adenylation; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
0.999
Dtox_2679
Oleoyl-(acyl-carrier-protein) hydrolase; PFAM: Thioesterase; KEGG: scl:sce0356 thioesterase.
  
 0.997
Dtox_2672
TIGRFAM: thiazolinyl imide reductase; PFAM: oxidoreductase domain protein; KEGG: ypy:YPK_0754 thiazolinyl imide reductase.
  
 0.986
Dtox_2673
PFAM: Saccharopine dehydrogenase; KEGG: pfl:PFL_3491 hypothetical protein.
   
 0.938
Dtox_1322
6-deoxyerythronolide-B synthase; PFAM: Acyl transferase; KR domain protein; Beta- ketoacyl synthase; short-chain dehydrogenase/reductase SDR; KEGG: sde:Sde_3725 polyketide synthase modules and related proteins-like.
 
 0.932
Dtox_0907
TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: neu:NE0014 anthranilate synthase component II.
  
 
 0.866
Dtox_4187
TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: bar:GBAA0069 para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II.
  
 
 0.866
trpC
PFAM: Indole-3-glycerol phosphate synthase; KEGG: dal:Dalk_1436 indole-3-glycerol-phosphate synthase; Belongs to the TrpC family.
  
 
 0.817
Dtox_2778
PFAM: Indole-3-glycerol phosphate synthase; KEGG: sat:SYN_02591 indole-3-glycerol phosphate synthase.
  
 
 0.817
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.