STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2692Hypothetical protein. (152 aa)    
Predicted Functional Partners:
Dtox_2387
TIGRFAM: sporulation protein YunB; KEGG: baa:BA_0080 hypothetical protein.
  
     0.688
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.663
Dtox_2604
Hypothetical protein; KEGG: bha:BH2790 mutants block sporulation after engulfment.
 
     0.660
Dtox_1125
Hypothetical protein.
  
     0.575
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.528
Dtox_1115
KEGG: bha:BH0549 hypothetical protein.
  
     0.517
Dtox_0071
Hypothetical protein; KEGG: geo:Geob_2630 tetratricopeptide TPR_2 repeat protein.
  
     0.514
Dtox_2045
KEGG: bha:BH2768 hypothetical protein.
  
     0.507
Dtox_1071
KEGG: cla:Cla_0048 anaerobic ribonucleoside triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; SMART: Hedgehog/intein hint domain protein.
  
     0.503
Dtox_2104
TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein; KEGG: bar:GBAA2068 stage II sporulation protein P.
  
     0.479
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.