STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2703Hypothetical protein; KEGG: nha:Nham_0736 putative general secretion pathway protein J. (167 aa)    
Predicted Functional Partners:
Dtox_2704
KEGG: sat:SYN_01760 hypothetical protein.
  
  
 0.935
Dtox_2702
Hypothetical protein; KEGG: aeh:Mlg_0861 Tfp pilus assembly protein PilX- like protein.
  
  
 0.922
Dtox_2699
Hypothetical protein; KEGG: dat:HRM2_11010 PilO.
  
  
 0.758
Dtox_2705
Hypothetical protein; KEGG: sat:SYN_01761 pilin assembly protein.
  
  
 0.728
Dtox_2706
Type II secretory pathway pseudopilin PulG-like protein; KEGG: mmr:Mmar10_2778 general secretion pathway protein G.
  
  
 0.711
Dtox_2701
KEGG: gbm:Gbem_1546 type IV pilus assembly protein PilM.
     
 0.710
Dtox_2700
Hypothetical protein.
       0.676
Dtox_2707
PFAM: type II secretion system protein; KEGG: sat:SYN_01284 general secretion pathway protein F.
     
 0.546
Dtox_2698
PFAM: peptidase U62 modulator of DNA gyrase; KEGG: gme:Gmet_2720 microcin-processing peptidase 2.
       0.465
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.