STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2808PFAM: ABC-2 type transporter; KEGG: sat:SYN_00244 export ABC transporter permease protein. (380 aa)    
Predicted Functional Partners:
Dtox_2809
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gbm:Gbem_3276 ABC transporter related protein.
  
 0.996
Dtox_2810
PFAM: secretion protein HlyD family protein; KEGG: glo:Glov_3107 secretion protein HlyD family protein.
  
 0.966
Dtox_2057
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_2887 ABC transporter related.
  
 0.959
Dtox_0553
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_1827 ABC transporter related.
  
 0.949
Dtox_1781
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce7371 ABC-2 type transport system ATP- binding protein.
  
 0.947
Dtox_3796
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00774 ABC transporter ATP-binding protein.
  
 0.947
Dtox_1807
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acp:A2cp1_0670 ABC transporter related.
  
 0.943
Dtox_1628
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0382 ABC transporter ATP-binding protein.
 
  
 0.915
Dtox_0444
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce6750 ABC transporter, ATP-binding protein.
      0.904
Dtox_0515
KEGG: bar:GBAA2786 glycine betaine/L-proline ABC transporter, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain-containing protein; SMART: AAA ATPase; CBS domain-containing protein.
 
      0.896
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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