STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2850Hypothetical protein; KEGG: aba:Acid345_0662 parallel beta-helix repeat protein. (665 aa)    
Predicted Functional Partners:
Dtox_2853
KEGG: afw:Anae109_2634 hypothetical protein.
 
     0.839
Dtox_1866
Hypothetical protein; KEGG: sfu:Sfum_3184 replicative DNA helicase.
  
     0.774
Dtox_1981
PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: surface antigen BspA-like.
  
   0.774
Dtox_3913
KEGG: sat:SYN_01895 putative cytoplasmic protein.
  
    0.771
Dtox_2738
Sugar kinase-like protein; KEGG: mch:Mchl_2163 beta-ribofuranosylaminobenzene 5'-phosphate synthase family.
  
     0.770
Dtox_3908
TIGRFAM: phage uncharacterized protein; KEGG: hsm:HSM_0666 phage uncharacterized protein.
  
     0.770
Dtox_1847
KEGG: ecg:E2348C_2658 hypothetical protein.
  
     0.769
Dtox_1868
PFAM: TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: hypothetical protein.
  
     0.762
Dtox_1865
KEGG: plu:plu3472 hypothetical protein.
  
     0.760
Dtox_1878
Oxygen-sensitive ribonucleoside-triphosphate reductase-like protein; KEGG: cps:CPS_0092 anaerobic ribonucleoside triphosphate reductase.
  
     0.755
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.