STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2881TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family; KEGG: baa:BA_2006 hypothetical protein. (440 aa)    
Predicted Functional Partners:
Dtox_3421
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: acr:Acry_3575 IS605 family transposase OrfB.
  
     0.694
Dtox_0186
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: acr:Acry_3575 IS605 family transposase OrfB.
  
     0.692
Dtox_2121
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; KEGG: acr:Acry_3575 IS605 family transposase OrfB.
  
     0.681
Dtox_1832
TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; transposase IS200- family protein; KEGG: acr:Acry_3575 IS605 family transposase OrfB.
  
    0.673
Dtox_2781
PFAM: Resolvase domain; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: xfm:Xfasm12_1564 hypothetical protein.
  
    0.532
Dtox_1241
PFAM: Resolvase domain; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: xfm:Xfasm12_1564 hypothetical protein.
  
    0.528
Dtox_1806
Putative transmembrane anti-sigma factor.
  
     0.524
Dtox_0751
PFAM: Resolvase domain; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: xfm:Xfasm12_1564 hypothetical protein.
  
    0.522
Dtox_0851
PFAM: regulatory protein MerR; Resolvase domain; SMART: regulatory protein MerR; KEGG: xfm:Xfasm12_1564 hypothetical protein.
  
    0.514
Dtox_4230
KEGG: vvu:VV1_0114 hypothetical protein.
  
     0.470
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.