STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2889PFAM: protein of unknown function DUF291; GLUG domain protein; KEGG: mms:mma_0761 haemagglutinin-like protein. (1672 aa)    
Predicted Functional Partners:
Dtox_2890
Hypothetical protein.
       0.741
Dtox_2891
Hypothetical protein; KEGG: sfu:Sfum_2373 HPr kinase.
       0.731
Dtox_2892
KEGG: sfu:Sfum_3985 hypothetical protein.
       0.731
Dtox_2888
PFAM: coagulation factor 5/8 type domain protein; KEGG: gur:Gura_0755 coagulation factor 5/8 type domain-containing protein.
 
     0.703
Dtox_2893
Hypothetical protein.
       0.632
Dtox_2894
KEGG: ppd:Ppro_0062 hypothetical protein.
       0.573
Dtox_2887
PFAM: Tail Collar domain protein; KEGG: pna:Pnap_4722 phage tail collar domain- containing protein.
       0.551
Dtox_3488
PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: yen:YE2321 hypothetical protein.
  
    0.428
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.