STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2903Hypothetical protein. (887 aa)    
Predicted Functional Partners:
Dtox_0561
PFAM: copper amine oxidase domain protein; KEGG: bar:GBAA3367 cell wall anchor domain- containing protein.
   
 
 0.567
Dtox_0619
SMART: Pyrrolo-quinoline quinone; KEGG: similar to Acyl-CoA synthetase family member 4 (Protein NRPS998).
   
 
 0.567
Dtox_1960
PFAM: Pyrrolo-quinoline quinone; KEGG: bsu:BSU39940 hypothetical protein.
   
 
 0.567
Dtox_1962
PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; Pyrrolo-quinoline quinone; KEGG: aba:Acid345_4167 pyrrolo-quinoline quinone.
   
 
 0.567
Dtox_1963
PFAM: S-layer domain protein; Ig domain protein group 2 domain protein; Pyrrolo-quinoline quinone; SMART: Ig domain protein group 2 domain protein; Pyrrolo-quinoline quinone; KEGG: sty:HCM2.0066c hypothetical protein.
   
 
 0.567
Dtox_1964
PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: sus:Acid_4533 pyrrolo-quinoline quinone.
   
 
 0.567
Dtox_1969
PFAM: GLUG domain protein; KEGG: azc:AZC_1396 hypothetical protein.
   
 
 0.567
Dtox_1972
Hypothetical protein; KEGG: geo:Geob_3347 cytochrome c family protein.
   
 
 0.567
Dtox_1979
Hypothetical protein; KEGG: surface antigen BspA-like.
   
 
 0.567
Dtox_1202
Signal peptidase I; KEGG: dat:HRM2_27790 LepB; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; Belongs to the peptidase S26 family.
  
  
 0.529
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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