STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2918PFAM: protein of unknown function DUF214; KEGG: sat:SYN_01995 export ABC transporter permease protein. (405 aa)    
Predicted Functional Partners:
Dtox_2919
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ank:AnaeK_3059 ABC transporter-related protein.
 
 0.997
Dtox_1572
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_7937 ABC transporter related.
 
 0.991
Dtox_1041
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ank:AnaeK_3059 ABC transporter-related protein.
 
 0.990
Dtox_4104
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppr:PBPRB0368 putative ABC transporter, ATP- binding protein.
 
 0.988
Dtox_2874
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: acp:A2cp1_2841 ABC transporter related.
 
 
 0.952
Dtox_2920
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: aca:ACP_0524 efflux transporter, RND family, MFP subunit.
  
 0.922
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
      0.900
Dtox_2282
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: scl:sce4768 ABC-type transporter, ATP-binding protein.
 
      0.899
Dtox_0515
KEGG: bar:GBAA2786 glycine betaine/L-proline ABC transporter, ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain-containing protein; SMART: AAA ATPase; CBS domain-containing protein.
 
      0.883
Dtox_0446
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvu:VV1_0837 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
    0.873
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.