STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_2989KEGG: aci:ACIAD1964 putative protein kinase. (472 aa)    
Predicted Functional Partners:
Dtox_2990
KEGG: ypp:YPDSF_0379 hypothetical protein.
 
   
 0.954
Dtox_2991
PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: yps:YPTB3462 putative tellurium resistance protein.
 
    0.918
Dtox_2992
PFAM: stress protein; KEGG: rru:Rru_A0892 stress protein.
 
     0.827
Dtox_2988
PFAM: stress protein; KEGG: baa:BA_0975 bacterial stress protein.
 
     0.823
Dtox_2993
PFAM: stress protein; KEGG: bsu:BSU02910 hypothetical protein.
 
     0.636
Dtox_2996
PFAM: stress protein; KEGG: yps:YPTB0356 tellurium resistance protein.
 
     0.600
Dtox_0575
PFAM: stress protein; KEGG: bsu:BSU02910 hypothetical protein.
 
     0.537
Dtox_0577
PFAM: stress protein; KEGG: bsu:BSU02910 hypothetical protein.
 
     0.515
Dtox_2199
KEGG: lpn:lpg2069 transposase Tn5.
  
     0.497
Dtox_0576
PFAM: stress protein; KEGG: bsu:BSU02890 hypothetical protein.
 
     0.488
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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