STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_3084Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: baa:BA_1839 HATPase_c, histidine kinase-, DNA gyrase B-, phytochrome-like ATPase. (496 aa)    
Predicted Functional Partners:
Dtox_1955
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA4833 DNA-binding response regulator PhoP.
 
 0.982
Dtox_1077
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH3157 two-component response regulator involved in phosphate regulation.
 
 0.981
Dtox_1723
KEGG: dat:HRM2_43250 sensory box histidine kinase/response regulator; PFAM: response regulator receiver; Hpt domain protein; SMART: response regulator receiver.
 
 
 0.976
Dtox_3085
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bha:BH1580 two-component response regulator.
 
 0.969
Dtox_1577
KEGG: bha:BH2234 response regulatory protein (sensory transduction system); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain-containing protein; response regulator receiver; SMART: GGDEF domain-containing protein; response regulator receiver.
   
 0.951
Dtox_1377
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: gme:Gmet_3383 two component transcriptional regulator.
 
 0.925
Dtox_2915
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA3661 DNA-binding response regulator.
 
 0.909
Dtox_1554
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bar:GBAA4777 DNA-binding response regulator.
 
 0.883
Dtox_3784
PFAM: CheB methylesterase; KEGG: pin:Ping_3721 CheB-type protein glutamate methylesterase.
 
      0.869
Dtox_2625
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: baa:BA_2476 REC, CheY-homologous receiver domain.
 
 0.855
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.