STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_3261PFAM: filamentation induced by cAMP protein Fic; KEGG: apj:APJL_0871 filamentation induced by cAMP protein Fic-like protein. (502 aa)    
Predicted Functional Partners:
Dtox_4190
PFAM: filamentation induced by cAMP protein Fic; KEGG: wol:WD1314 Fic family protein.
  
     0.769
Dtox_3262
Transcriptional regulator, XRE family; KEGG: cha:CHAB381_0330 hypothetical protein.
       0.636
Dtox_3124
PFAM: Collagen triple helix repeat; KEGG: mlo:mlr0585 hypothetical protein.
  
     0.484
Dtox_1784
ATPase-like protein; KEGG: bpy:Bphyt_1074 abortive phage resistance protein-like protein.
  
     0.475
Dtox_0998
KEGG: mmw:Mmwyl1_4371 hypothetical protein.
 
     0.444
Dtox_3263
HIRAN; PFAM: HIRAN; KEGG: dat:HRM2_19300 hypothetical protein.
       0.442
Dtox_1326
KEGG: plu:plu3558 hypothetical protein.
  
     0.440
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
   0.433
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
   0.433
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.