STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_3405PFAM: Fe-S cluster domain protein; KEGG: dol:Dole_1915 Fe-S cluster domain-containing protein. (266 aa)    
Predicted Functional Partners:
Dtox_1275
PFAM: CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel; KEGG: dol:Dole_3186 acetyl-CoA decarbonylase/synthase complex subunit delta.
 
 
 0.964
Dtox_1271
KEGG: sfu:Sfum_2565 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit.
 
 
 0.953
Dtox_3781
KEGG: sfu:Sfum_2565 CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; TIGRFAM: CO dehydrogenase/acetyl-CoA synthase complex, beta subunit; PFAM: CO dehydrogenase/acetyl-CoA synthase complex beta subunit.
 
 
 0.953
Dtox_1274
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dol:Dole_1488 cobyrinic acid ac-diamide synthase.
 
  
 0.763
Dtox_2542
KEGG: sfu:Sfum_2761 cobyrinic acid a,c-diamide synthase.
 
  
 0.761
Dtox_1610
KEGG: dal:Dalk_2588 hypothetical protein.
  
     0.748
Dtox_1284
KEGG: dal:Dalk_3264 hypothetical protein.
 
   
 0.727
Dtox_1302
KEGG: sfu:Sfum_1719 hypothetical protein.
  
     0.718
Dtox_2548
KEGG: dal:Dalk_0684 hypothetical protein.
 
     0.712
Dtox_2940
KEGG: dol:Dole_0046 hypothetical protein.
  
     0.712
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.