STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_3446PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pca:Pcar_0231 ABC-type transport system, ATPase component. (213 aa)    
Predicted Functional Partners:
Dtox_3445
Molybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 0.998
Dtox_3448
TIGRFAM: NifC-like ABC-type porter; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dat:HRM2_01690 putative molybdenum ABC-type transporter, permease subunit.
  
  0.997
Dtox_3449
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sat:SYN_00079 ABC-type sugar transport systems, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 
0.963
Dtox_3444
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: bsu:BSU33380 hypothetical protein.
  
 0.961
Dtox_3447
TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: dps:DP1350 molybdenum ABC transporter periplasmic substrate-binding protein.
 
  
 0.939
Dtox_3452
KEGG: bsu:BSU33380 hypothetical protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; spore coat assembly protein SafA; PFAM: extracellular solute-binding protein family 1; Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM.
  
 0.910
Dtox_0540
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH0350 oligopeptide ABC transporter ATP- binding protein.
 
    
0.848
Dtox_0348
KEGG: reh:H16_B1125 ABC-type transporter, ATPase component: PepT family; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.831
Dtox_0447
KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.633
Dtox_3303
TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: ppd:Ppro_1379 DNA internalization-related competence protein ComEC/Rec2.
  
  
 0.587
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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