STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_3474PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mag:amb4338 ABC-type cobalt transport system, ATPase component. (230 aa)    
Predicted Functional Partners:
Dtox_3473
PFAM: cobalt transport protein; KEGG: bha:BH0166 hypothetical protein.
 
 0.996
Dtox_0318
PFAM: cobalt transport protein; KEGG: baa:BA_0724 cobalt transport protein.
 0.993
Dtox_1966
PFAM: cobalt transport protein; KEGG: bar:GBAA3365 ABC transporter permease.
 
 0.958
Dtox_3475
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dal:Dalk_4065 ABC transporter related.
 
  
 
0.943
Dtox_0562
PFAM: cobalt transport protein; KEGG: bar:GBAA3365 ABC transporter permease.
 
 0.926
Dtox_0317
ABC transporter related; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
  
 
0.922
Dtox_0446
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: vvu:VV1_0837 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  
0.914
Dtox_0243
PFAM: BioY protein; KEGG: baa:BA_0023 BioY family.
 
 
 0.911
Dtox_2654
PFAM: cobalt transport protein; KEGG: hha:Hhal_0380 cobalt transport protein.
  
 0.908
Dtox_4332
PFAM: BioY protein; KEGG: sfu:Sfum_1749 BioY protein.
   
 0.900
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.