STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_3480PFAM: metallophosphoesterase; KEGG: afw:Anae109_3838 metallophosphoesterase. (532 aa)    
Predicted Functional Partners:
Dtox_3478
PFAM: S-layer domain protein; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: bar:GBAA2315 S-layer protein, putative.
     0.631
Dtox_3487
KEGG: mfa:Mfla_0117 MotA/TolQ/ExbB proton channel.
 
     0.529
Dtox_2833
PFAM: metallophosphoesterase; KEGG: acid phosphatase.
  
     0.518
Dtox_3481
KEGG: cjj:CJJ81176_0752 hypothetical protein.
   
   0.517
Dtox_3488
PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: yen:YE2321 hypothetical protein.
 
     0.515
Dtox_3479
PFAM: protein of unknown function DUF1533.
      
0.470
Dtox_3484
PFAM: Ig domain protein group 2 domain protein; S- layer domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: bar:GBAA2528 N-acetylmuramoyl-L-alanine amidase.
      0.443
Dtox_3489
PFAM: S-layer domain protein; KEGG: hypothetical protein.
      0.408
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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