STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_3483Hypothetical protein. (177 aa)    
Predicted Functional Partners:
Dtox_3482
Hypothetical protein.
       0.743
Dtox_3484
PFAM: Ig domain protein group 2 domain protein; S- layer domain protein; SMART: Ig domain protein group 2 domain protein; KEGG: bar:GBAA2528 N-acetylmuramoyl-L-alanine amidase.
       0.584
Dtox_3481
KEGG: cjj:CJJ81176_0752 hypothetical protein.
       0.571
Dtox_3485
KEGG: sbn:Sbal195_4447 hypothetical protein.
       0.432
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.