STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_3575PFAM: methyl-viologen-reducing hydrogenase delta subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfu:Sfum_1050 methyl-viologen-reducing hydrogenase, delta subunit. (736 aa)    
Predicted Functional Partners:
Dtox_3573
CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: tbd:Tbd_1645 heterodisulfide reductase, B subunit.
 
 
 0.988
Dtox_1355
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dal:Dalk_5062 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.963
Dtox_1349
CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: geo:Geob_3724 CoB--CoM heterodisulfide reductase.
 
 
 0.959
Dtox_1352
CoB--CoM heterodisulfide reductase; PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: geo:Geob_3724 CoB--CoM heterodisulfide reductase.
 
 
 0.957
Dtox_3574
KEGG: sfu:Sfum_0820 putative heterodisulfide reductase, C subunit.
 
 
 0.940
Dtox_3576
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1287 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
 
0.938
Dtox_3577
TIGRFAM: adenylylsulfate reductase, alpha subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: sfu:Sfum_1048 adenylylsulfate reductase.
 
  
 0.928
Dtox_3578
TIGRFAM: adenylylsulfate reductase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1047 adenylylsulfate reductase, beta subunit.
 
     0.876
Dtox_1351
KEGG: dde:Dde_1207 heterodisulfide reductase, C subunit.
 
 
 0.864
Dtox_1348
KEGG: dde:Dde_3524 heterodisulfide reductase, C subunit.
 
 
 0.852
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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