STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_3752PFAM: protein of unknown function DUF291; KEGG: ade:Adeh_3063 VCBS. (662 aa)    
Predicted Functional Partners:
Dtox_3746
KEGG: sun:SUN_1515 hypothetical protein.
 
     0.803
Dtox_3749
KEGG: sfu:Sfum_3985 hypothetical protein.
 
     0.774
Dtox_3751
Hypothetical protein.
       0.773
Dtox_3753
Hypothetical protein; KEGG: geo:Geob_1283 outer membrane adhesin like proteiin.
      
0.773
Dtox_3747
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sus:Acid_0085 ABC transporter related.
 
    0.740
Dtox_3750
Hypothetical protein; KEGG: sfu:Sfum_2373 HPr kinase.
 
     0.709
Dtox_2894
KEGG: ppd:Ppro_0062 hypothetical protein.
  
     0.597
Dtox_3748
Hypothetical protein; KEGG: sfu:Sfum_3987 peptidase S24, S26A and S26B.
  
    0.551
Dtox_4129
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
     
 0.486
Dtox_2892
KEGG: sfu:Sfum_3985 hypothetical protein.
  
     0.480
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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