STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_3766PFAM: small acid-soluble spore protein alpha/beta type; KEGG: bha:BH1138 small acid-soluble spore protein (major alpha-type SASP). (98 aa)    
Predicted Functional Partners:
Dtox_0985
PFAM: protein of unknown function UPF0153; KEGG: sun:SUN_1697 hypothetical protein.
  
     0.698
Dtox_1266
PFAM: protein of unknown function UPF0153; KEGG: dat:HRM2_07420 hypothetical protein.
  
     0.692
Dtox_1021
PFAM: protein of unknown function DUF939; KEGG: bar:GBAA0529 putative lipoprotein.
  
     0.646
Dtox_2068
KEGG: bsu:BSU23400 sporulation protein VAE.
  
    0.535
Dtox_0525
KEGG: hypothetical protein.
  
     0.525
Dtox_0991
Di-trans,poly-cis-decaprenylcistransferase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: ppr:PBPRA2964 putative undecaprenyl diphosphate synthase.
  
     0.492
Dtox_0193
PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: hypothetical protein.
  
     0.470
Dtox_3667
Hypothetical protein; KEGG: baa:BA_1053 ERM, ezrin/radixin/moesin family.
  
     0.462
Dtox_3767
TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain protein; KEGG: afr:AFE_0423 aconitate hydratase.
       0.449
Dtox_0223
TIGRFAM: spore cortex biosynthesis protein YabQ; KEGG: bar:GBAA0058 hypothetical protein.
  
     0.431
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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