STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_4069Hypothetical protein. (160 aa)    
Predicted Functional Partners:
Dtox_4070
Hypothetical protein.
      0.952
Dtox_2332
PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: bsu:BSU15640 hypothetical protein.
  
  
 0.812
Dtox_4071
KEGG: gur:Gura_3880 hypothetical protein.
       0.701
Dtox_1784
ATPase-like protein; KEGG: bpy:Bphyt_1074 abortive phage resistance protein-like protein.
  
  
 0.693
Dtox_2434
KEGG: cko:CKO_03472 hypothetical protein.
  
    0.623
Dtox_2785
Superfamily I DNA and RNA helicase and helicase subunits-like protein; KEGG: zmo:ZMO0695 hypothetical protein.
  
    0.623
Dtox_4068
Hypothetical protein.
       0.523
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.