STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_4100PFAM: glycosyl transferase group 1; KEGG: ftn:FTN_1427 glycosyl transferase, group 1. (362 aa)    
Predicted Functional Partners:
Dtox_4101
PFAM: sugar transferase; KEGG: bha:BH3716 galactosyltransferase.
  
 0.949
Dtox_2852
Undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; KEGG: pca:Pcar_1519 sugar transferase.
 
  
 0.811
Dtox_2855
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short- chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: aba:Acid345_3097 NAD-dependent epimerase/dehydratase.
 
    0.645
Dtox_3989
PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; short- chain dehydrogenase/reductase SDR; KEGG: dat:HRM2_29750 CapD1.
 
    0.606
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.562
Dtox_4099
PFAM: sulfotransferase; KEGG: dat:HRM2_25330 putative 3-beta-hydroxysteroid sulfotransferase (phenol sulfotransferase).
   
   0.538
Dtox_4129
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.538
Dtox_4097
PFAM: glycosyl transferase group 1; KEGG: hha:Hhal_0770 glycosyl transferase, group 1.
 
     0.532
Dtox_2863
Nucleotide sugar dehydrogenase; KEGG: sus:Acid_4597 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.517
Dtox_4098
Hypothetical protein; KEGG: pub:SAR11_0548 unknown membrane protein.
       0.503
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
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