STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtox_4122PFAM: polysaccharide pyruvyl transferase; KEGG: baa:BA_1468 hypothetical protein. (367 aa)    
Predicted Functional Partners:
Dtox_4123
Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
   
 0.965
Dtox_4119
PFAM: glycosyl transferase group 1; KEGG: mca:MCA2126 glycosyl transferase, group 1 family protein.
    0.945
Dtox_4121
KEGG: hypothetical protein.
 
     0.897
Dtox_1638
PFAM: glycosyl transferase group 1; KEGG: sus:Acid_4857 glycosyl transferase, group 1.
 
    0.885
Dtox_4120
TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: bsu:BSU35520 hypothetical protein.
 
     0.819
Dtox_4113
PFAM: glycosyl transferase family 4; KEGG: baa:BA_0288 glycosyl transferase.
 
   
 0.790
Dtox_4147
PFAM: S-layer domain protein; KEGG: baa:BA_1454 Amidase_2, N-acetylmuramoyl-L- alanine amidase.
 
   
 0.781
Dtox_3582
PFAM: S-layer domain protein; KEGG: hypothetical protein.
 
     0.777
Dtox_1982
PFAM: S-layer domain protein; cellulosome anchoring protein cohesin region; KEGG: bar:GBAA2803 S-layer protein, putative.
  
     0.774
Dtox_3843
PFAM: S-layer domain protein; KEGG: hypothetical protein.
  
     0.774
Your Current Organism:
Desulfofarcimen acetoxidans
NCBI taxonomy Id: 485916
Other names: D. acetoxidans DSM 771, Desulfofarcimen acetoxidans DSM 771, Desulfotomaculum acetoxidans DSM 771
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.