Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Phep_0426 | Phep_0427 | Phep_0426 | Phep_0427 | PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. | Conserved hypothetical protein. | 0.953 |
Phep_0426 | Phep_0428 | Phep_0426 | Phep_0428 | PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. | PFAM: 3-dehydroquinate synthase. | 0.950 |
Phep_0426 | Phep_0429 | Phep_0426 | Phep_0429 | PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. | PFAM: UbiA prenyltransferase family. | 0.960 |
Phep_0426 | Phep_0430 | Phep_0426 | Phep_0430 | PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. | TatD-related deoxyribonuclease; PFAM: TatD related DNase. | 0.961 |
Phep_0426 | Phep_0431 | Phep_0426 | Phep_0431 | PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. | Hypothetical protein. | 0.961 |
Phep_0427 | Phep_0426 | Phep_0427 | Phep_0426 | Conserved hypothetical protein. | PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.953 |
Phep_0427 | Phep_0428 | Phep_0427 | Phep_0428 | Conserved hypothetical protein. | PFAM: 3-dehydroquinate synthase. | 0.960 |
Phep_0427 | Phep_0429 | Phep_0427 | Phep_0429 | Conserved hypothetical protein. | PFAM: UbiA prenyltransferase family. | 0.961 |
Phep_0427 | Phep_0430 | Phep_0427 | Phep_0430 | Conserved hypothetical protein. | TatD-related deoxyribonuclease; PFAM: TatD related DNase. | 0.963 |
Phep_0427 | Phep_0431 | Phep_0427 | Phep_0431 | Conserved hypothetical protein. | Hypothetical protein. | 0.961 |
Phep_0428 | Phep_0426 | Phep_0428 | Phep_0426 | PFAM: 3-dehydroquinate synthase. | PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase. | 0.950 |
Phep_0428 | Phep_0427 | Phep_0428 | Phep_0427 | PFAM: 3-dehydroquinate synthase. | Conserved hypothetical protein. | 0.960 |
Phep_0428 | Phep_0429 | Phep_0428 | Phep_0429 | PFAM: 3-dehydroquinate synthase. | PFAM: UbiA prenyltransferase family. | 0.960 |
Phep_0428 | Phep_0430 | Phep_0428 | Phep_0430 | PFAM: 3-dehydroquinate synthase. | TatD-related deoxyribonuclease; PFAM: TatD related DNase. | 0.958 |
Phep_0428 | Phep_0431 | Phep_0428 | Phep_0431 | PFAM: 3-dehydroquinate synthase. | Hypothetical protein. | 0.959 |
Phep_0428 | Phep_1512 | Phep_0428 | Phep_1512 | PFAM: 3-dehydroquinate synthase. | DAHP synthetase I/KDSA; PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase. | 0.909 |
Phep_0428 | Phep_1514 | Phep_0428 | Phep_1514 | PFAM: 3-dehydroquinate synthase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.925 |
Phep_0428 | aroA | Phep_0428 | Phep_1511 | PFAM: 3-dehydroquinate synthase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.969 |
Phep_0428 | aroK | Phep_0428 | Phep_3659 | PFAM: 3-dehydroquinate synthase. | Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. | 0.921 |
Phep_0428 | aroQ | Phep_0428 | Phep_2174 | PFAM: 3-dehydroquinate synthase. | 3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. | 0.937 |
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