Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Phep_0506 | Phep_0507 | Conserved hypothetical protein. | PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.667 |
Phep_0506 | Phep_0508 | Conserved hypothetical protein. | Ferredoxin; PFAM: Oxidoreductase NAD-binding domain; Oxidoreductase FAD-binding domain; 2Fe-2S iron-sulfur cluster binding domain. | 0.478 |
Phep_0506 | Phep_1254 | Conserved hypothetical protein. | PFAM: Putative glycosyl hydrolase of unknown function (DUF1680). | 0.431 |
Phep_0507 | Phep_0506 | PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Conserved hypothetical protein. | 0.667 |
Phep_0507 | Phep_0508 | PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | Ferredoxin; PFAM: Oxidoreductase NAD-binding domain; Oxidoreductase FAD-binding domain; 2Fe-2S iron-sulfur cluster binding domain. | 0.556 |
Phep_0508 | Phep_0506 | Ferredoxin; PFAM: Oxidoreductase NAD-binding domain; Oxidoreductase FAD-binding domain; 2Fe-2S iron-sulfur cluster binding domain. | Conserved hypothetical protein. | 0.478 |
Phep_0508 | Phep_0507 | Ferredoxin; PFAM: Oxidoreductase NAD-binding domain; Oxidoreductase FAD-binding domain; 2Fe-2S iron-sulfur cluster binding domain. | PFAM: Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family. | 0.556 |
Phep_1254 | Phep_0506 | PFAM: Putative glycosyl hydrolase of unknown function (DUF1680). | Conserved hypothetical protein. | 0.431 |