Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Phep_0381 | Phep_0647 | Phep_0381 | Phep_0647 | Hypothetical protein. | Hypothetical protein. | 0.768 |
Phep_0381 | Phep_0994 | Phep_0381 | Phep_0994 | Hypothetical protein. | Hypothetical protein. | 0.717 |
Phep_0381 | Phep_1167 | Phep_0381 | Phep_1167 | Hypothetical protein. | Hypothetical protein. | 0.675 |
Phep_0381 | Phep_1269 | Phep_0381 | Phep_1269 | Hypothetical protein. | PFAM: Surface antigen. | 0.617 |
Phep_0381 | Phep_1462 | Phep_0381 | Phep_1462 | Hypothetical protein. | Hypothetical protein; PFAM: Polyketide cyclase / dehydrase and lipid transport. | 0.759 |
Phep_0381 | Phep_1548 | Phep_0381 | Phep_1548 | Hypothetical protein. | Hypothetical protein. | 0.766 |
Phep_0381 | Phep_3560 | Phep_0381 | Phep_3560 | Hypothetical protein. | PFAM: Family of unknown function (DUF490). | 0.710 |
Phep_0381 | Phep_4030 | Phep_0381 | Phep_4030 | Hypothetical protein. | Hypothetical protein. | 0.766 |
Phep_0646 | Phep_0647 | Phep_0646 | Phep_0647 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Hypothetical protein. | 0.858 |
Phep_0646 | lpxK | Phep_0646 | Phep_0645 | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.866 |
Phep_0647 | Phep_0381 | Phep_0647 | Phep_0381 | Hypothetical protein. | Hypothetical protein. | 0.768 |
Phep_0647 | Phep_0646 | Phep_0647 | Phep_0646 | Hypothetical protein. | Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.858 |
Phep_0647 | Phep_0994 | Phep_0647 | Phep_0994 | Hypothetical protein. | Hypothetical protein. | 0.768 |
Phep_0647 | Phep_1167 | Phep_0647 | Phep_1167 | Hypothetical protein. | Hypothetical protein. | 0.814 |
Phep_0647 | Phep_1269 | Phep_0647 | Phep_1269 | Hypothetical protein. | PFAM: Surface antigen. | 0.758 |
Phep_0647 | Phep_1462 | Phep_0647 | Phep_1462 | Hypothetical protein. | Hypothetical protein; PFAM: Polyketide cyclase / dehydrase and lipid transport. | 0.776 |
Phep_0647 | Phep_1548 | Phep_0647 | Phep_1548 | Hypothetical protein. | Hypothetical protein. | 0.771 |
Phep_0647 | Phep_3560 | Phep_0647 | Phep_3560 | Hypothetical protein. | PFAM: Family of unknown function (DUF490). | 0.772 |
Phep_0647 | Phep_4030 | Phep_0647 | Phep_4030 | Hypothetical protein. | Hypothetical protein. | 0.766 |
Phep_0647 | lpxK | Phep_0647 | Phep_0645 | Hypothetical protein. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.858 |
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