node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Phep_0129 | Phep_0877 | Phep_0129 | Phep_0877 | Helix-hairpin-helix motif protein; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | 0.735 |
Phep_0129 | Phep_3235 | Phep_0129 | Phep_3235 | Helix-hairpin-helix motif protein; Adenine glycosylase active on G-A mispairs. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.547 |
Phep_0129 | Phep_4271 | Phep_0129 | Phep_4271 | Helix-hairpin-helix motif protein; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | 0.735 |
Phep_0129 | polA | Phep_0129 | Phep_4214 | Helix-hairpin-helix motif protein; Adenine glycosylase active on G-A mispairs. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.447 |
Phep_0318 | Phep_0877 | Phep_0318 | Phep_0877 | HhH-GPD family protein; PFAM: 8-oxoguanine DNA glycosylase, N-terminal domain; HhH-GPD superfamily base excision DNA repair protein. | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | 0.751 |
Phep_0318 | Phep_4271 | Phep_0318 | Phep_4271 | HhH-GPD family protein; PFAM: 8-oxoguanine DNA glycosylase, N-terminal domain; HhH-GPD superfamily base excision DNA repair protein. | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | 0.751 |
Phep_0318 | nth | Phep_0318 | Phep_3556 | HhH-GPD family protein; PFAM: 8-oxoguanine DNA glycosylase, N-terminal domain; HhH-GPD superfamily base excision DNA repair protein. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.418 |
Phep_0318 | polA | Phep_0318 | Phep_4214 | HhH-GPD family protein; PFAM: 8-oxoguanine DNA glycosylase, N-terminal domain; HhH-GPD superfamily base excision DNA repair protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.591 |
Phep_0877 | Phep_0129 | Phep_0877 | Phep_0129 | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | Helix-hairpin-helix motif protein; Adenine glycosylase active on G-A mispairs. | 0.735 |
Phep_0877 | Phep_0318 | Phep_0877 | Phep_0318 | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | HhH-GPD family protein; PFAM: 8-oxoguanine DNA glycosylase, N-terminal domain; HhH-GPD superfamily base excision DNA repair protein. | 0.751 |
Phep_0877 | Phep_1385 | Phep_0877 | Phep_1385 | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | PFAM: Endonuclease/Exonuclease/phosphatase family. | 0.900 |
Phep_0877 | Phep_3235 | Phep_0877 | Phep_3235 | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.788 |
Phep_0877 | Phep_4271 | Phep_0877 | Phep_4271 | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | 0.924 |
Phep_0877 | nth | Phep_0877 | Phep_3556 | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.708 |
Phep_0877 | polA | Phep_0877 | Phep_4214 | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.819 |
Phep_1385 | Phep_0877 | Phep_1385 | Phep_0877 | PFAM: Endonuclease/Exonuclease/phosphatase family. | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | 0.900 |
Phep_1385 | Phep_4271 | Phep_1385 | Phep_4271 | PFAM: Endonuclease/Exonuclease/phosphatase family. | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | 0.900 |
Phep_3235 | Phep_0129 | Phep_3235 | Phep_0129 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Helix-hairpin-helix motif protein; Adenine glycosylase active on G-A mispairs. | 0.547 |
Phep_3235 | Phep_0877 | Phep_3235 | Phep_0877 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | 0.788 |
Phep_3235 | Phep_4271 | Phep_3235 | Phep_4271 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Exodeoxyribonuclease III Xth; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III (xth); exodeoxyribonuclease III. | 0.788 |