Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Cpin_0156 | Cpin_0157 | PFAM: fatty acid desaturase; KEGG: hypothetical protein. | 3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.533 |
Cpin_0156 | Cpin_4346 | PFAM: fatty acid desaturase; KEGG: hypothetical protein. | Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rru:Rru_A2338 AraC family transcriptional regulator. | 0.444 |
Cpin_0156 | Cpin_4952 | PFAM: fatty acid desaturase; KEGG: hypothetical protein. | Putative large extracellular alpha-helical protein; KEGG: aba:Acid345_0928 alpha-2-macroglobulin-like. | 0.416 |
Cpin_0156 | Cpin_5738 | PFAM: fatty acid desaturase; KEGG: hypothetical protein. | Hypothetical protein. | 0.432 |
Cpin_0156 | Cpin_6473 | PFAM: fatty acid desaturase; KEGG: hypothetical protein. | KEGG: mxa:MXAN_0238 hypothetical protein. | 0.410 |
Cpin_0157 | Cpin_0156 | 3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | PFAM: fatty acid desaturase; KEGG: hypothetical protein. | 0.533 |
Cpin_4346 | Cpin_0156 | Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rru:Rru_A2338 AraC family transcriptional regulator. | PFAM: fatty acid desaturase; KEGG: hypothetical protein. | 0.444 |
Cpin_4952 | Cpin_0156 | Putative large extracellular alpha-helical protein; KEGG: aba:Acid345_0928 alpha-2-macroglobulin-like. | PFAM: fatty acid desaturase; KEGG: hypothetical protein. | 0.416 |
Cpin_4952 | Cpin_5738 | Putative large extracellular alpha-helical protein; KEGG: aba:Acid345_0928 alpha-2-macroglobulin-like. | Hypothetical protein. | 0.441 |
Cpin_5738 | Cpin_0156 | Hypothetical protein. | PFAM: fatty acid desaturase; KEGG: hypothetical protein. | 0.432 |
Cpin_5738 | Cpin_4952 | Hypothetical protein. | Putative large extracellular alpha-helical protein; KEGG: aba:Acid345_0928 alpha-2-macroglobulin-like. | 0.441 |
Cpin_6473 | Cpin_0156 | KEGG: mxa:MXAN_0238 hypothetical protein. | PFAM: fatty acid desaturase; KEGG: hypothetical protein. | 0.410 |