Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Cpin_1339 | Cpin_1340 | PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein. | KEGG: hypothetical protein. | 0.773 |
Cpin_1339 | Cpin_1341 | PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein. | KEGG: bcy:Bcer98_0358 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein. | 0.648 |
Cpin_1339 | Cpin_1342 | PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein. | PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; SMART: response regulator receiver; KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | 0.535 |
Cpin_1340 | Cpin_1339 | KEGG: hypothetical protein. | PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein. | 0.773 |
Cpin_1340 | Cpin_1341 | KEGG: hypothetical protein. | KEGG: bcy:Bcer98_0358 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein. | 0.648 |
Cpin_1340 | Cpin_1342 | KEGG: hypothetical protein. | PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; SMART: response regulator receiver; KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | 0.531 |
Cpin_1341 | Cpin_1339 | KEGG: bcy:Bcer98_0358 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein. | PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein. | 0.648 |
Cpin_1341 | Cpin_1340 | KEGG: bcy:Bcer98_0358 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein. | KEGG: hypothetical protein. | 0.648 |
Cpin_1341 | Cpin_1342 | KEGG: bcy:Bcer98_0358 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein. | PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; SMART: response regulator receiver; KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | 0.648 |
Cpin_1342 | Cpin_1339 | PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; SMART: response regulator receiver; KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | PFAM: KWG Leptospira repeat protein; KEGG: KWG repeat protein. | 0.535 |
Cpin_1342 | Cpin_1340 | PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; SMART: response regulator receiver; KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | KEGG: hypothetical protein. | 0.531 |
Cpin_1342 | Cpin_1341 | PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; SMART: response regulator receiver; KEGG: bph:Bphy_4576 response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase. | KEGG: bcy:Bcer98_0358 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein. | 0.648 |