STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_2002Magnesium transporter; Acts as a magnesium transporter. (458 aa)    
Predicted Functional Partners:
Cpin_2003
PFAM: protein of unknown function UPF0187; KEGG: mca:MCA3057 hypothetical protein.
       0.626
Cpin_2004
SMART: nuclear protein SET; KEGG: bcb:BCB4264_A5217 SET domain protein.
       0.518
Cpin_3333
PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: bba:Bd2267 putative potassium/proton antiporter.
     
 0.446
Cpin_1209
PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: glo:Glov_1262 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase.
 
   
 0.429
Cpin_3667
PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: ade:Adeh_3706 cystathionine beta-synthase.
     
 0.418
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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