STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cpin_2454Hypothetical protein. (81 aa)    
Predicted Functional Partners:
Cpin_2455
Hypothetical protein.
       0.508
Cpin_2456
Hypothetical protein.
       0.495
Cpin_2457
Hypothetical protein; KEGG: scl:sce4071 alpha-2-macroglobulin.
       0.474
Cpin_2458
KEGG: hypothetical protein.
       0.460
Cpin_2459
Hypothetical protein.
       0.460
Cpin_2460
TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: nma:NMA0976 putative signal peptidase I; Belongs to the peptidase S26 family.
       0.434
Cpin_2461
PFAM: O-antigen polymerase; KEGG: pin:Ping_0368 O-antigen polymerase.
       0.434
Cpin_2462
KEGG: sde:Sde_1703 hypothetical protein.
       0.424
Your Current Organism:
Chitinophaga pinensis
NCBI taxonomy Id: 485918
Other names: C. pinensis DSM 2588, Chitinophaga pinensis ACM 2034, Chitinophaga pinensis DSM 2588, Chitinophaga pinensis str. DSM 2588, Chitinophaga pinensis strain DSM 2588
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.